The DIAN Quality Control Uploader requires that certain fields exist in the specific files. The tool maps the data in these files into the xnat:qcManualAssessor element of xnat.xsd.

Inclusion File

Details whether the participant meets the study criteria and the overall passing and payable status. File contains a single line for each session.

Columns

CSV Column xnat.xsd Mapping Required
patid qcManualAssessorData/imageSession_ID Yes
sdate qcManualAssessorData/date Yes
initials qcManualAssessorData/rater No
surgery Appended into qcManualAssessorData/incidentalFindings No
hemmorhage Appended into qcManualAssessorData/incidentalFindings No
dev_anomaly Appended into qcManualAssessorData/incidentalFindings No
lesion Appended into qcManualAssessorData/incidentalFindings No
atrophy Appended into qcManualAssessorData/incidentalFindings No
infarction Appended into qcManualAssessorData/incidentalFindings No
trauma Appended into qcManualAssessorData/incidentalFindings No
metallic Appended into qcManualAssessorData/incidentalFindings No
nph Appended into qcManualAssessorData/incidentalFindings No
edema Appended into qcManualAssessorData/incidentalFindings No
other Appended into qcManualAssessorData/incidentalFindings No
pass qcManualAssessorData/pass Yes
pay_site qcManualAssessorData/payable No
rescan qcManualAssessorData/rescan No
comments qcManualAssessorData/comments No

Sample File

patid,sdate,field,coil,pass,quarantine,rescan,pay_site,comments
5894213_MR1,20090324,3,HeadMatrix,1,1,0,1,""

Quality File

Details about QC on each individual scan. File contains a line for each scan for each session.

Required Columns

CSV Column xnat.xsd Mapping Required
seriesnumber mrQcScanData/imageScan_ID Yes
in_bgr mrQcScanData/blurring No
in_flow mrQcScanData/flow No
in_other mrQcScanData/otherImageArtifacts No
wrap mrQcScanData/wrap No
headcoverage mrQcScanData/coverage No
inhomogeneity mrQcScanData/inhomogeneity No
ip_motion mrQcScanData/interpacMotion No
marker Merged into qcManualAssessorData/stereotacticMarker No
pass mrQcScanData/pass Yes
comments mrQcScanData/comments No
susceptibility mrQcScanData/susceptibility No
head_motion mrQcScanData/motion No

Sample File

patid,sdate,field,coil,seriesnumber,seriesdescription,in_bgr,in_flow,in_other,wrap,headcoverage,susceptibility,head_motion,ip_motion,marker,pass,comments
5894213_MR1,20090324,3,HeadMatrix,12,"SWI_Images",1,0,0,0,0,-1,-1,-1,0,1,""
5894213_MR1,20090324,3,HeadMatrix,8,"MoCoSeries",0,0,0,0,0,-1,-1,-1,0,1,""